Package: FAMoS 0.3.1
FAMoS: A Flexible Algorithm for Model Selection
Given a set of parameters describing model dynamics and a corresponding cost function, FAMoS performs a dynamic forward-backward model selection on a specified selection criterion. It also applies a non-local swap search method. Works on any cost function. For detailed information see Gabel et al. (2019) <doi:10.1371/journal.pcbi.1007230>.
Authors:
FAMoS_0.3.1.tar.gz
FAMoS_0.3.1.zip(r-4.7)FAMoS_0.3.1.zip(r-4.6)FAMoS_0.3.1.zip(r-4.5)
FAMoS_0.3.1.tgz(r-4.6-any)FAMoS_0.3.1.tgz(r-4.5-any)
FAMoS_0.3.1.tar.gz(r-4.7-any)FAMoS_0.3.1.tar.gz(r-4.6-any)
FAMoS_0.3.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
FAMoS/json (API)
NEWS
| # Install 'FAMoS' in R: |
| install.packages('FAMoS', repos = c('https://gabelhub.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/gabelhub/famos/issues
- famos.run - FAMoS performance test run
Last updated from:3e132906f8. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 114 | ||
| source / vignettes | OK | 167 | ||
| linux-release-x86_64 | OK | 122 | ||
| macos-release-arm64 | OK | 138 | ||
| macos-oldrel-arm64 | OK | 155 | ||
| windows-devel | OK | 85 | ||
| windows-release | OK | 70 | ||
| windows-oldrel | OK | 71 | ||
| wasm-release | OK | 100 |
Exports:aicc.weightsbase.optimcombine.and.fitcombine.parfamosfamos.performanceget.most.distantmake.directoriesmodel.apprparscale.famosrandom.init.modelretrieve.resultsreturn.resultssc.orderset.crit.parms
Dependencies:codetoolsdigestfutureglobalslistenvparallellyR.methodsS3R.ooR.utils
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Plot evidence ratios | aicc.weights |
| Fit Parameters of a Model | base.optim |
| Combine and Fit Parameters | combine.and.fit |
| Combine Fitted and Non-fitted Parameters | combine.par |
| Automated Model Selection | famos |
| Plot FAMoS Performance | famos.performance |
| FAMoS performance test run | famos.run |
| Get Most Distant Model | get.most.distant |
| Create Results Directories | make.directories |
| Test for Model Appropriateness | model.appr |
| Control Function for Optim | parscale.famos |
| Generate Random Starting Model | random.init.model |
| Retrieve Model Results | retrieve.results |
| Return Final Results | return.results |
| Plot Model selection Criteria | sc.order |
| Convert Critical and Swap Sets | set.crit.parms |
